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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808752.1_cds_XP_016495483.1_9796
CDS Infomation

[gene=LOC107814558] [db_xref=GeneID:107814558] [protein=pentatricopeptide repeat-containing protein At1g09820-like isoform X2] [protein_id=XP_016495483.1] [location=complement(join(1957..1968,3291..3354,4604..4676,8314..8374,9131..9348,9456..9627,11264..11632))] [gbkey=CDS]
Sequence

ATGGCTGGCATTTCCATACACTACTTACCTTTCAATTCCAAATTCACTCTCCCAATTCCC
CGTCCATCAATTTCTCGGTCAATTAAGGCGTCGGTATCGTCGCAACCGCGGAAAACCAGA
AGAAGAAAACAGACACAGCAGCAGCAGCAGCTGAAGACGGCGGAAGATGACGGTTCTATG
GCATCCGGAACTGAAAAAGTGTTACGGCTTGTTTTTATGGAGGAATTGATGAAACGCGCT
CGAAATGCTGATTCTAAAGGTGTATCTCAAGTGATTTATGATATGATTGCTGCTGGTCTC
TCCCCTGGACCTCGTTCTTTCCATGGATTCGTTGTTTCTCATGTCCTTAACCGCGACAAT
GATGGCGCTATGCATGCTCTTAGAAGGGAGTTGAGTGAAGGTCTTCGGCCTCTACATGAA
ACATTTTTGGCATTGGTTCGTTTGTTTGGTGCCAAGGGTCTTGCTACGAGAGGCTTAGAA
ATTCTTGCAGCAATGGAGAAACTGAAATATGACATTCGCCAAGCTTGGCTGGTTCTTGTT
GAGGAGCTTGTACGGAGTAATCATCTAGAAGATGCCAACAAAGTGTTTCTCAAGGGTGCT
GAGGGTGGACTCAGAGCAACTGACGAGATCTATGATCTCCTAATAGAACAAGATTGTAAA
GTAGGAGATCACTCAAATGCCTTAACTATTGCCTATGAAATGGAGGCTGCTGGTAGAATG
GCCTCTACCTTCCATTTCAATTGTCTTTTGAGCGTACAGGCTACCTGTGGGATACCTGAA
ATTGCTTTTGCGACATTTGAGAACATGGAGTATGGTGAAGATCATATGAAACCTGATACC
GAGACATATAATTGGGTTATCCAAGCATATACAAGGGCTGAGTCCTATGATAGAGTGCAG
GATGTTGCTGAGCTACTCGGGATGATGGTTGAGGACCATAAACGTGTGCAACCTAACTTT
GTTGGTTGA

Peptide Sequence

PEP ID

XP_016495483.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g09820-like isoform X2 [Nicotiana tabacum]
Sequence

MAGISIHYLPFNSKFTLPIPRPSISRSIKASVSSQPRKTRRRKQTQQQQQLKTAEDDGSM
ASGTEKVLRLVFMEELMKRARNADSKGVSQVIYDMIAAGLSPGPRSFHGFVVSHVLNRDN
DGAMHALRRELSEGLRPLHETFLALVRLFGAKGLATRGLEILAAMEKLKYDIRQAWLVLV
EELVRSNHLEDANKVFLKGAEGGLRATDEIYDLLIEQDCKVGDHSNALTIAYEMEAAGRM
ASTFHFNCLLSVQATCGIPEIAFATFENMEYGEDHMKPDTETYNWVIQAYTRAESYDRVQ
DVAELLGMMVEDHKRVQPNFVG

Transcript Sequence

Gene sequence data has not been registered.